NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1124865 Query DataSets for GSM1124865
Status Public on Oct 20, 2013
Title Insm1 control #9
Sample type RNA
 
Source name Insm1 control #9_pituitary gland
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
genotype/variation: Insm1 +/-
developmental stage: embryo
age: E17.5
tissue: pituitary gland
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 5003391030_a
replicate 9
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
 
Submission date Apr 17, 2013
Last update date Oct 20, 2013
Contact name Jochen Welcker
E-mail(s) jochen.welcker@gmx.de
Organization name MDC Berlin
Street address Robert-Rössle-Str. 10
City Berlin
ZIP/Postal code 13125
Country Germany
 
Platform ID GPL6885
Series (1)
GSE46139 Genome-wide analysis of E17.5 pituitary gland gene expression of control and Insm1 mutant mice

Data table header descriptions
ID_REF
VALUE quantile normalized signal [AVG_Signal]
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 2103.903 0
ILMN_2707227 13.89718 0.06265664
ILMN_2896528 6689.623 0
ILMN_2721178 964.1516 0
ILMN_1227723 321.4781 0
ILMN_3033922 1537.543 0
ILMN_3092673 8769.092 0
ILMN_2730714 4448.288 0
ILMN_3162224 2310.193 0
ILMN_2816356 31.10244 0.002506266
ILMN_2808939 1047.656 0
ILMN_2634564 322.3062 0
ILMN_1216623 855.8486 0
ILMN_1215157 1322.219 0
ILMN_1228777 11.18754 0.1027569
ILMN_2737647 8.549499 0.1441103
ILMN_1216425 -6.636094 0.7393484
ILMN_2734484 2076.055 0
ILMN_2652961 -0.9198576 0.4273183
ILMN_2952292 89.53799 0

Total number of rows: 25697

Table truncated, full table size 706 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap