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Sample GSM1132916 Query DataSets for GSM1132916
Status Public on Jun 24, 2014
Title Neuroblastoma-MYCN-Tum22
Sample type RNA
 
Source name MYCN tumor
Organism Mus musculus
Characteristics strain: 129S2 or 129B6F1
tissue: Neuroblastoma
Treatment protocol N/A
Growth protocol N/A
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.14.0.0, ENTREZG)
 
Submission date May 02, 2013
Last update date Sep 08, 2015
Contact name Alex Cazes
E-mail(s) alex.cazes@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City paris
State/province Please select...
ZIP/Postal code 75005
Country France
 
Platform ID GPL16225
Series (1)
GSE46583 Expression data from neuroblastoma of TH-MYCN/KI Alk mice
Relations
Reanalyzed by GSE72678

Data table header descriptions
ID_REF
VALUE Normalized log2 ratio

Data table
ID_REF VALUE
100008567_at 5.713603731
100009600_at 2.049752222
100012_at 2.33237758
100017_at 2.75200301
100019_at 8.018389343
100034251_at 8.19049457
100034739_at 2.110559772
100034748_at 3.363073631
100036520_at 2.594734195
100036521_at 9.581300322
100036523_at 2.547637591
100036768_at 2.364354837
100037258_at 8.730056895
100037262_at 1.975897638
100037278_at 5.476673166
100038347_at 5.284875872
100038358_at 2.028650576
100038371_at 2.597228983
100038392_at 2.261148984
100038398_at 6.916248842

Total number of rows: 17306

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM1132916_MM17_ARN0057_s1h1_Moe430p2.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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