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Sample GSM1132919 Query DataSets for GSM1132919
Status Public on Jun 24, 2014
Title Neuroblastoma-MYCN-Tum25
Sample type RNA
 
Source name MYCN tumor
Organism Mus musculus
Characteristics strain: 129S2 or 129B6F1
tissue: Neuroblastoma
Treatment protocol N/A
Growth protocol N/A
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.14.0.0, ENTREZG)
 
Submission date May 02, 2013
Last update date Sep 08, 2015
Contact name Alex Cazes
E-mail(s) alex.cazes@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City paris
State/province Please select...
ZIP/Postal code 75005
Country France
 
Platform ID GPL16225
Series (1)
GSE46583 Expression data from neuroblastoma of TH-MYCN/KI Alk mice
Relations
Reanalyzed by GSE72678

Data table header descriptions
ID_REF
VALUE Normalized log2 ratio

Data table
ID_REF VALUE
100008567_at 6.329696014
100009600_at 2.083554514
100012_at 2.450614811
100017_at 2.342596913
100019_at 8.769146148
100034251_at 7.497114279
100034739_at 2.191555383
100034748_at 2.905417861
100036520_at 2.723925323
100036521_at 9.026113598
100036523_at 2.650316921
100036768_at 2.461598463
100037258_at 7.701087882
100037262_at 1.998185167
100037278_at 6.68590234
100038347_at 5.044563056
100038358_at 2.090426262
100038371_at 2.805776279
100038392_at 2.348887976
100038398_at 2.884554824

Total number of rows: 17306

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM1132919_MM17_ARN0060_s1h1_Moe430p2.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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