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Sample GSM1132926 Query DataSets for GSM1132926
Status Public on Jun 24, 2014
Title Neuroblastoma-MYCN-Tum33
Sample type RNA
 
Source name MYCN tumor
Organism Mus musculus
Characteristics strain: 129S2 or 129B6F1
tissue: Neuroblastoma
Treatment protocol N/A
Growth protocol N/A
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.14.0.0, ENTREZG)
 
Submission date May 02, 2013
Last update date Sep 08, 2015
Contact name Alex Cazes
E-mail(s) alex.cazes@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City paris
State/province Please select...
ZIP/Postal code 75005
Country France
 
Platform ID GPL16225
Series (1)
GSE46583 Expression data from neuroblastoma of TH-MYCN/KI Alk mice
Relations
Reanalyzed by GSE72678

Data table header descriptions
ID_REF
VALUE Normalized log2 ratio

Data table
ID_REF VALUE
100008567_at 6.96228391
100009600_at 2.065361198
100012_at 2.404401427
100017_at 2.194194944
100019_at 8.293676126
100034251_at 7.228984713
100034739_at 2.1717223
100034748_at 5.471174912
100036520_at 2.659305241
100036521_at 8.836142761
100036523_at 2.740040333
100036768_at 2.432648063
100037258_at 7.543143591
100037262_at 1.982521117
100037278_at 6.893302635
100038347_at 5.229021673
100038358_at 2.070111327
100038371_at 2.746810919
100038392_at 2.285507981
100038398_at 2.829833695

Total number of rows: 17306

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM1132926_MM24_ARN0006_s1h1_Moe430p2.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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