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Sample GSM1132929 Query DataSets for GSM1132929
Status Public on Jun 24, 2014
Title Neuroblastoma-MYCN/ALK.F1178L-Tum36
Sample type RNA
 
Source name MYCN/ALK.F1178L tumor
Organism Mus musculus
Characteristics strain: 129S2 or 129B6F1
tissue: Neuroblastoma
Treatment protocol N/A
Growth protocol N/A
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.14.0.0, ENTREZG)
 
Submission date May 02, 2013
Last update date Sep 08, 2015
Contact name Alex Cazes
E-mail(s) alex.cazes@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City paris
State/province Please select...
ZIP/Postal code 75005
Country France
 
Platform ID GPL16225
Series (1)
GSE46583 Expression data from neuroblastoma of TH-MYCN/KI Alk mice
Relations
Reanalyzed by GSE72678

Data table header descriptions
ID_REF
VALUE Normalized log2 ratio

Data table
ID_REF VALUE
100008567_at 2.44474119
100009600_at 2.092509649
100012_at 2.428799897
100017_at 2.205861509
100019_at 8.42058523
100034251_at 7.686479579
100034739_at 2.1985508
100034748_at 2.562629315
100036520_at 2.704967652
100036521_at 9.737088791
100036523_at 2.617665093
100036768_at 2.448494948
100037258_at 7.476950684
100037262_at 1.998799964
100037278_at 6.168559192
100038347_at 6.440907184
100038358_at 2.092997816
100038371_at 2.783132136
100038392_at 2.298453341
100038398_at 10.17997678

Total number of rows: 17306

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM1132929_MM24_ARN0009_s1h1_Moe430p2.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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