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Sample GSM113361 Query DataSets for GSM113361
Status Public on Jul 01, 2006
Title Liver myofibroblast
Sample type SAGE
Anchor NlaIII
Tag Count 13072
Tag Length 10
 
Source name Liver myofibroblast
Organism Homo sapiens
Characteristics Tissue: liver
Transformed stellate cells from liver
Myofibroblast
Extracted molecule total RNA
 
Description End stage of transformed stellate cells
 
Submission date Jun 08, 2006
Last update date Nov 19, 2008
Contact name Willem Boers
E-mail(s) w.boers@amc.uva.nl
Phone +31205668832
Fax +31205669190
Organization name Academic Medical Center
Department AMC Liver Center
Street address Meibergdreef 69
City Amsterdam
ZIP/Postal code 1105 BK
Country Netherlands
 
Platform ID GPL4
Series (1)
GSE5022 Transformation of stellate cells to myofibroblasts

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
GATAGCACAG 193 14764.38
ACAAAGCATT 152 11627.91
TGTGTTGAGA 134 10250.92
TACCATCAAT 102 7802.94
CCCTGGGTTC 95 7267.44
TTGGGGTTTC 75 5737.45
GCTTTATTTG 75 5737.45
GCCCCCAATA 74 5660.95
ACCAAAAACC 64 4895.96
GATGAGGAGA 64 4895.96
AAAAAAAAAA 63 4819.46
CCCATCGTCC 57 4360.47
CATATCATTA 55 4207.47
GAGAGTGTCT 54 4130.97
ACAGGCTACG 51 3901.47
CACCTAATTG 51 3901.47
CTTGATTCCC 49 3748.47
GGGGAAATCG 46 3518.97
CTAAGACTTC 45 3442.47
ATGTGAAGAG 45 3442.47

Total number of rows: 6306

Table truncated, full table size 118 Kbytes.




Supplementary data files not provided
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