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Sample GSM1140742 Query DataSets for GSM1140742
Status Public on Feb 13, 2014
Title Monocyte_CD14+ [5342595013_A]
Sample type RNA
 
Source name peripheral blood
Organism Homo sapiens
Characteristics initial differentiation: -
activation stimuli: unstimulated
time: 0h
donor: D2
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Monocyte
Data processing The data were log2-transformed and normalized using quantile normalization with Partek Genomics Suite
 
Submission date May 14, 2013
Last update date Feb 13, 2014
Contact name Joachim Schultze
E-mail(s) j.schultze@uni-bonn.de
Organization name LIMES (Life and Medical Sciences Center Genomics and Immunoregulation)
Department Genomics and Immunoregulation
Street address Carl-Troll-Strasse 31
City Bonn
State/province NRW
ZIP/Postal code 53115
Country Germany
 
Platform ID GPL6947
Series (2)
GSE46903 Transcriptome-based network analysis reveals a spectrum model of human macrophage activation [Expression]
GSE47189 Transcriptome-based network analysis reveals a spectrum model of human macrophage activation

Data table header descriptions
ID_REF
VALUE log2-transformed,quantile normalized
5342595013_A.Detection Pval

Data table
ID_REF VALUE 5342595013_A.Detection Pval
ILMN_1762337 6.31138 0.538867
ILMN_2055271 6.43506 0.156785
ILMN_1736007 6.56182 0.0342556
ILMN_2383229 6.26284 0.693017
ILMN_1806310 6.4578 0.126482
ILMN_1779670 6.25473 0.73386
ILMN_1653355 6.49003 0.085639
ILMN_1717783 6.13712 0.955204
ILMN_1705025 6.30517 0.554677
ILMN_1814316 6.38416 0.300395
ILMN_2359168 6.34774 0.413702
ILMN_1731507 6.29901 0.578393
ILMN_1787689 6.32275 0.484848
ILMN_1745607 6.35578 0.386034
ILMN_2136495 6.36922 0.343874
ILMN_1668111 6.19113 0.901186
ILMN_2295559 6.40202 0.242424
ILMN_1735045 6.34628 0.417655
ILMN_1680754 6.28659 0.620553
ILMN_2375184 6.54408 0.0421607

Total number of rows: 47463

Table truncated, full table size 1324 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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