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Sample GSM11455 Query DataSets for GSM11455
Status Public on Jan 01, 2004
Title V5-P301
Sample type RNA
 
Source name bone marrow
Organism Homo sapiens
Extracted molecule total RNA
 
Description Following Ficoll-Hypaque gradient centrifugation, plasma cells obtained from the bone marrow were isolated from the mononuclear cell fraction by immunomagnetic bead selection using a monoclonal mouse anti-human CD138 antibody (Miltenyi-Biotec, Auburn, CA).
More than 90 percent of the cells used for gene expression profiling were plasma cells, as shown by two-color flow cytometry using CD138+/CD45- and CD38+/CD45- markers, the presence of cytoplasmic immunoglobulin light chains by immunocytochemistry, and morphology by Wright-Giemsa staining.
MRI-no-lytic-lesion sample
Keywords = multiple myeloma, osteolytic lesions, MRI, osteoblast, mesenchymal stem cell, Wnt signaling, DKK1
 
Submission date Oct 16, 2003
Last update date Mar 16, 2009
Contact name John D. Shaughnessy
E-mail(s) jshaughnessy@uams.edu
Phone 1-501-296-1503, X1457
Fax 1-501-686-6442
URL http://lambertlab.uams.edu/
Organization name Myeloma Institute for Research and Therapy
Department Division of Basic Sciences
Lab Donna D. and Donald M. Lambert Laboratory of Myeloma Genetics
Street address 4301 West Markham St., Slot 776
City Little Rock
State/province AR
ZIP/Postal code 72205
Country USA
 
Platform ID GPL8300
Series (2)
GSE753 MRI-no-lytic-lesion
GSE755 MRI lytic and no lytic lesions

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
100_g_at 2367.50 P 0.01
1000_at 4515.40 P 5.643e-03
1001_at 67.30 A 0.39
1002_f_at 164.80 A 0.54
1003_s_at 210.60 A 0.62
1004_at 425.40 A 0.28
1005_at 5839.90 P 3.88e-04
1006_at 26.70 A 0.50
1007_s_at 991.60 P 0.03
1008_f_at 13399.90 P 3.585e-03
1009_at 18531.80 P 2.66e-04
101_at 1654.40 P 8.689e-03
1010_at 374.30 A 0.08
1011_s_at 4144.30 P 2.66e-04
1012_at 371.60 A 0.06
1013_at 379.30 P 4.18e-03
1014_at 3023.90 P 8.529e-03
1015_s_at 108.80 A 0.81
1016_s_at 8.80 A 0.96
1017_at 254.30 P 0.02

Total number of rows: 12625

Table truncated, full table size 306 Kbytes.




Supplementary data files not provided

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