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Sample GSM114932 Query DataSets for GSM114932
Status Public on Jun 21, 2006
Title Mammary MT1-MMP rep2
Sample type RNA
 
Source name cell line 184B5-MT
Organism Homo sapiens
Characteristics cell line 184B5-MT. Mammary epithelial. Gender: Female. Age: Derived from 184B5 by transfection with a full length MT1-MMP lentiviral construct.
Extracted molecule total RNA
Extraction protocol Illumina TotalPrep RNA amplification kit (Ambion Catalog#IL1791)
Label Streptavidin Cy3
Label protocol As described in the illumina Human-6 chip processing protocol. Briefly, generation of biotin labelled cRNA from the product of RT cDNA synthesis and 2nd strand cDNA synthesis.
 
Hybridization protocol As described in the illumina Human-6 hybridisation protocol. Doc#11176837 Rev E.
Scan protocol As suggested by Illumina using the Illumina scanner.
Description Second biological replicate from three for the transfected 184B5-MT cell line
Data processing None: raw data from Beadstudio
 
Submission date Jun 16, 2006
Last update date Jun 20, 2006
Contact name Roy M Williams
E-mail(s) rwillia@scripps.edu
Organization name The Scripps Research Institute
Department Regenerative Medicine
Lab Loring
Street address 3030 Science Park Road
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL2507
Series (1)
GSE5095 MT1-MMP induces malignant transformation in Mammary cells

Data table header descriptions
ID_REF
VALUE RAW Beadstudio output 1387809015_E_B5_MT

Data table
ID_REF VALUE
GI_10047089-S 98.2
GI_10047091-S 113.9
GI_10047093-S 262.8
GI_10047099-S 269.6
GI_10047103-S 1542.3
GI_10047105-S 830
GI_10047121-S 93.1
GI_10047123-S 210.7
GI_10047133-A 92.4
GI_10047133-I 111.3
GI_10092578-S 83.4
GI_10092585-S 170.2
GI_10092596-S 225.5
GI_10092600-S 778
GI_10092602-S 100.2
GI_10092603-S 108.4
GI_10092611-A 140.8
GI_10092616-S 101.8
GI_10092618-S 3881.8
GI_10092638-S 312.2

Total number of rows: 47293

Table truncated, full table size 837 Kbytes.




Supplementary data files not provided

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