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Sample GSM115323 Query DataSets for GSM115323
Status Public on Aug 29, 2007
Title Placebo treated, HIV-1 positive male, day 14 (2)
Sample type RNA
 
Source name Percutaneous biopsies of vastus lateralis
Organism Homo sapiens
Characteristics HIV-1 positive male, 18-60 years old, weight loss of 5-15% in preceding 6 months, stable anti-retroviral therapy. CD4+ T-cells >50/ml, HIV copies =< 10,000/ml, free testosterone <50pg/ml.
Extracted molecule total RNA
Label Biotin
 
Description Sample collected 14d post treatment
Data processing GCOSv1.2
 
Submission date Jun 20, 2006
Last update date Aug 29, 2007
Contact name Monty Montano
E-mail(s) mmontano@bu.edu
Phone 617 414-4806
Fax 617 414-3561
URL http://www.bmc.org/HIV-AIDS/MontyMontano.htm
Organization name Boston Medical Center
Department Medicine
Lab Center for HIV-1/AIDS Care and Research
Street address 650 Albany Street, Bldg X, room 640
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL571
Series (1)
GSE5106 Gene Profiling of Testosterone-Regulated Genes in the Skeletal Muscle of Hiv-Infected Men Experiencing Weight Loss

Data table header descriptions
ID_REF
UNSCALED_VALUE Unscaled intensity values
DETECTION_P-VALUE Quality of measurement
ABS_CALL Present, absent or marginal call
VALUE Scaled intensity values

Data table
ID_REF UNSCALED_VALUE DETECTION_P-VALUE ABS_CALL VALUE
1007_s_at 58.6 0.006532 P 536.2
1053_at 28.8 0.001889 P 263.4
117_at 8.1 0.014937 P 74.4
121_at 29.9 0.048995 P 273.3
1255_g_at 0.6 0.795978 A 5.5
1294_at 23.3 0.021866 P 213
1316_at 10.5 0.073796 A 96.3
1320_at 0.7 0.964837 A 6.3
1405_i_at 9 0.015164 P 82.2
1431_at 6 0.089405 A 54.9
1438_at 0.7 0.796017 A 6.3
1487_at 206.7 0.000959 P 1892.5
1494_f_at 8.6 0.107301 A 78.7
1598_g_at 193.8 0.000468 P 1773.7
160020_at 12.6 0.013092 P 115.5
1729_at 8.4 0.602006 A 76.7
177_at 2.1 0.581931 A 18.8
1773_at 14.5 0.098054 A 132.5
179_at 75.7 0.043968 P 693.2
1861_at 16.2 0.043968 P 147.9

Total number of rows: 22277

Table truncated, full table size 687 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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