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GEO accession:
Sample GSM11815
Query DataSets for GSM11815
Status
Public on Nov 25, 2003
Title
C035 Renal Clear Cell Carcinoma U133B
Sample type
RNA
Source name
Trizol isolation of total RNA from Renal Clear Cell Carcinoma tissue
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Age = 70; Gender = Female; Right Kidney; Tumor Type = clear cell; Tumor Fuhrman Grade = 3; Tumor Capsule Penetration = true; Tumor Perinephric Fat Invasion = true; Tumor Renal Sinus Invasion = false; Tumor Renal Vein Invasion = true; Scaling Target = 500; Scaling Factor = 14.77; Raw Q = 2.47; Noise = 2.53; Background = 57.93.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2002912
Submission date
Oct 20, 2003
Last update date
May 28, 2005
Contact name
Marc E. Lenburg
E-mail(s)
mlenburg@bu.edu
Phone
617-414-1375
Fax
617-414-1646
URL
http://gg.bu.edu
Organization name
Boston University School of Medicine
Department
Genetics and Genomics
Street address
715 Albany Street, E613B
City
Boston
State/province
MA
ZIP/Postal code
02130
Country
USA
Platform ID
GPL97
Series (1)
GSE781
Normal and Renal Cell Carcinoma Kidney Tissue, Human
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
1215.3
P
AFFX-BioB-M_at
2119.8
P
AFFX-BioB-3_at
1269.3
P
AFFX-BioC-5_at
3169.8
P
AFFX-BioC-3_at
2010.1
P
AFFX-BioDn-5_at
3019.9
P
AFFX-BioDn-3_at
14787.3
P
AFFX-CreX-5_at
30703.7
P
AFFX-CreX-3_at
46273.7
P
AFFX-DapX-5_at
97.5
A
AFFX-DapX-M_at
54.2
A
AFFX-DapX-3_at
33.4
A
AFFX-LysX-5_at
62.9
A
AFFX-LysX-M_at
40.7
A
AFFX-LysX-3_at
127.3
A
AFFX-PheX-5_at
33.1
A
AFFX-PheX-M_at
21.8
A
AFFX-PheX-3_at
125.5
A
AFFX-ThrX-5_at
19.9
A
AFFX-ThrX-M_at
133.7
A
Total number of rows:
22645
Table truncated, full table size
399 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM11815.CEL.gz
3.2 Mb
(ftp)
(http)
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