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Sample GSM11823 Query DataSets for GSM11823
Status Public on Nov 25, 2003
Title N023 Normal Human Kidney U133A
Sample type RNA
 
Source name Trizol isolation of total RNA from normal tissue adjacent to Renal Cell Carcinoma
Organism Homo sapiens
Extracted molecule total RNA
 
Description Age = 72; Gender = Female; Right Kidney; Tumor Type = clear cell; Adjacent Tumor Fuhrman Grade = 1; Adjacent Tumor Capsule Penetration = true; Adjacent Tumor Perinephric Fat Invasion = false; Adjacent Tumor Renal Sinus Invasion = false; Adjacent Tumor Renal Vein Invasion = false; Tumor Location: mid; Scaling Target = 500; Scaling Factor = 7.30; Raw Q = 2.49; Noise = 2.89; Background = 56.96.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2004638
 
Submission date Oct 20, 2003
Last update date May 28, 2005
Contact name Marc E. Lenburg
E-mail(s) mlenburg@bu.edu
Phone 617-414-1375
Fax 617-414-1646
URL http://gg.bu.edu
Organization name Boston University School of Medicine
Department Genetics and Genomics
Street address 715 Albany Street, E613B
City Boston
State/province MA
ZIP/Postal code 02130
Country USA
 
Platform ID GPL96
Series (1)
GSE781 Normal and Renal Cell Carcinoma Kidney Tissue, Human

Data table header descriptions
ID_REF
VALUE MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 1039.8 P
AFFX-BioB-M_at 2821.5 P
AFFX-BioB-3_at 1245.1 P
AFFX-BioC-5_at 2636 P
AFFX-BioC-3_at 2183.1 P
AFFX-BioDn-5_at 3382 P
AFFX-BioDn-3_at 14822.6 P
AFFX-CreX-5_at 26777.6 P
AFFX-CreX-3_at 36448.5 P
AFFX-DapX-5_at 7.2 A
AFFX-DapX-M_at 59.3 A
AFFX-DapX-3_at 15.7 A
AFFX-LysX-5_at 7.5 A
AFFX-LysX-M_at 14.5 A
AFFX-LysX-3_at 43.6 A
AFFX-PheX-5_at 5.1 A
AFFX-PheX-M_at 15.2 A
AFFX-PheX-3_at 49.7 A
AFFX-ThrX-5_at 18.4 A
AFFX-ThrX-M_at 40.9 A

Total number of rows: 22283

Table truncated, full table size 403 Kbytes.




Supplementary file Size Download File type/resource
GSM11823.CEL.gz 3.3 Mb (ftp)(http) CEL

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