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Sample GSM1184252 Query DataSets for GSM1184252
Status Public on Jul 10, 2013
Title Heart_BXH-9/TyJ
Sample type RNA
 
Source name Left Ventricle, 10 wks
Organism Mus musculus
Characteristics gender: female
strain: BXH-9/TyJ
agent: untreated
tissue: Left Ventricle
Treatment protocol Starting at 8-9 weeks, mice were treated for 3 weeks with 30 ug/g body weight/ day of Isoproterenol or were untreated controls for the same period of time
Extracted molecule total RNA
Extraction protocol total RNA was extracted using the Quiagen miRNAeasy 96-well kits using standard protocol. RNA integrity was determined using an Agilent Bioanalyzer
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 8803799020_G
Data processing GenomeStudio V2010.3 (Gene Expression 1.8.0 module).
Ddata was analyzed using the limma R package.
 
Submission date Jul 10, 2013
Last update date Jul 10, 2013
Contact name Christoph Daniel Rau
E-mail(s) chrau@ucla.edu
Organization name UCLA
Street address 675 Charles E Young Drive S
City Los Angeles
State/province United States
ZIP/Postal code 90095
Country USA
 
Platform ID GPL6885
Series (1)
GSE48760 Transcriptomes of the hybrid mouse diversity panel subjected to Isoproterenol challenge

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pvalue

Data table
ID_REF VALUE Detection Pvalue
ILMN_1248788 6.358091339 0.001253133
ILMN_2707227 4.490051769 0.6491228
ILMN_2896528 12.43024786 0
ILMN_2721178 10.85703334 0
ILMN_1227723 9.773449019 0
ILMN_3033922 10.7611233 0
ILMN_3092673 12.51391345 0
ILMN_2730714 12.92322909 0
ILMN_3162224 11.32384609 0
ILMN_2816356 5.289381496 0.04385965
ILMN_2808939 7.607845007 0
ILMN_2634564 8.066942106 0
ILMN_1216623 8.042987039 0
ILMN_1215157 8.887703863 0
ILMN_1228777 4.41227688 0.8834587
ILMN_2737647 6.261077727 0.002506266
ILMN_1216425 4.501480104 0.6165413
ILMN_2734484 7.735965744 0
ILMN_2652961 4.989933827 0.07894737
ILMN_2952292 4.957267779 0.09022556

Total number of rows: 25697

Table truncated, full table size 813 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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