GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM119110
Query DataSets for GSM119110
Status
Public on Sep 27, 2006
Title
5202764005790181113004.G11
Sample type
RNA
Source name
cmap_well:1115
Organism
Homo sapiens
Characteristics
perturbagen: small molecule
type: treatment
name: 5286656
concentration: .00005 M
vehicle: DMSO
vehicle_final: .1 %
duration: 6 h
cell: MCF7
Extracted molecule
total RNA
Label
biotin
Description
MCF7 treated with 5286656 (.00005 M) for 6 h
Data processing
MAS 5.0
Submission date
Jul 06, 2006
Last update date
Sep 18, 2006
Contact name
Justin Lamb
E-mail(s)
justin@broad.mit.edu
Organization name
Broad Institute
Street address
Seven Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platform ID
GPL3921
Series (1)
GSE5258
Connectivity Map dataset (build01)
Data table header descriptions
ID_REF
VALUE
average difference
ABS_CALL
(A)bsent, (P)resent, (M)arginal
Data table
ID_REF
VALUE
ABS_CALL
1007_s_at
3739
P
1053_at
730.5
P
117_at
10.5
A
121_at
117.1
P
1255_g_at
2
A
1294_at
49.3
A
1316_at
19.3
A
1320_at
24.6
A
1405_i_at
13.2
A
1431_at
52.2
M
1438_at
107
P
1487_at
333.9
P
1494_f_at
6.4
A
1598_g_at
123.9
P
160020_at
34.8
A
1729_at
471.3
P
1773_at
77.6
A
177_at
36.3
A
179_at
71.3
A
1861_at
320.1
P
Total number of rows:
22268
Table truncated, full table size
396 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM119110.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|