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GEO accession:
Sample GSM119168
Query DataSets for GSM119168
Status
Public on Sep 27, 2006
Title
5202764005791175120104.A04
Sample type
RNA
Source name
cmap_well:1006
Organism
Homo sapiens
Characteristics
perturbagen: small molecule
type: treatment
name: trichostatin A
concentration: .000001 M
vehicle: DMSO
vehicle_final: .1 %
duration: 6 h
cell: MCF7
Extracted molecule
total RNA
Label
biotin
Description
MCF7 treated with trichostatin A (.000001 M) for 6 h
Data processing
MAS 5.0
Submission date
Jul 06, 2006
Last update date
Sep 18, 2006
Contact name
Justin Lamb
E-mail(s)
justin@broad.mit.edu
Organization name
Broad Institute
Street address
Seven Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platform ID
GPL3921
Series (1)
GSE5258
Connectivity Map dataset (build01)
Data table header descriptions
ID_REF
VALUE
average difference
ABS_CALL
(A)bsent, (P)resent, (M)arginal
Data table
ID_REF
VALUE
ABS_CALL
1007_s_at
1262.1
P
1053_at
610.7
P
117_at
3.4
A
121_at
72.7
P
1255_g_at
2.5
A
1294_at
27.6
A
1316_at
6.3
A
1320_at
62
P
1405_i_at
18.7
A
1431_at
51.7
A
1438_at
194.9
P
1487_at
187.3
P
1494_f_at
27.7
A
1598_g_at
79.3
M
160020_at
43.8
A
1729_at
183.3
P
1773_at
74.3
P
177_at
6.4
A
179_at
46.5
A
1861_at
180.7
P
Total number of rows:
22268
Table truncated, full table size
395 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM119168.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
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