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Sample GSM1202829 Query DataSets for GSM1202829
Status Public on Aug 01, 2014
Title Blood_02
Sample type RNA
 
Source name Blood_02
Organism Homo sapiens
Characteristics tissue: Blood
Extracted molecule total RNA
Extraction protocol Total RNA including miRNA was isolated from each body fluids by Qiagen Rneasy Mini Kit according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Following ligation, ligated miRNA were hybridized for 18 hr at 48℃ on miRNA 3.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol miRNA 3.0 array were scanned using the Affymetrix GeneChip scanner 3000
Description miRNA expression data from blood
Data processing The data were analyzed with Robust Multi-array average (RMA) using Affymetrix expression console 1.3
 
Submission date Aug 07, 2013
Last update date Aug 01, 2014
Contact name Jonglyul Park
E-mail(s) nlcguard@kribb.re.kr
Organization name Korea Research Institute of Bioscience and Biotechnology
Department Medical genomics
Street address 52, Eoeun-dong, Yuseong-gu
City daejeon
ZIP/Postal code 305-806
Country South Korea
 
Platform ID GPL16384
Series (1)
GSE49630 miRNA expression data from saliva, blood, semen and vaginal swap

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
14q0_st 0.6462168
14qI-1_st 0.7141754
14qI-1_x_st 1.265769
14qI-2_st 0.8158721
14qI-3_x_st 1.17237
14qI-4_st 0.8991077
14qI-4_x_st 0.703235
14qI-5_st 0.8570263
14qI-6_st 0.9343236
14qI-6_x_st 1.046303
14qI-7_st 1.175031
14qI-8_st 0.8104883
14qI-8_x_st 0.9483525
14qI-9_x_st 0.3614182
14qII-1_st 1.091967
14qII-1_x_st 0.9403022
14qII-10_st 0.8114143
14qII-10_x_st 0.4439844
14qII-11_st 0.9763257
14qII-11_x_st 0.435951

Total number of rows: 5683

Table truncated, full table size 153 Kbytes.




Supplementary file Size Download File type/resource
GSM1202829_Blood_02.CEL.gz 845.4 Kb (ftp)(http) CEL
Processed data included within Sample table

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