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Sample GSM12099 Query DataSets for GSM12099
Status Public on Nov 25, 2003
Title N005 Normal Human Kidney U133B
Sample type RNA
 
Source name Trizol isolation of total RNA from normal tissue adjacent to Renal Cell Carcinoma
Organism Homo sapiens
Extracted molecule total RNA
 
Description Age = 64; Gender = Male; Right Kidney; Adjacent Tumor Type = clear cell; Adjacent Tumor Fuhrman Grade = 1; Adjacent Tumor Capsule Penetration = false; Adjacent Tumor Perinephric Fat Invasion = false; Adjacent Tumor Renal Sinus Invasion = false; Adjacent Tumor Renal Vein Invasion = false; Scaling Target = 500; Scaling Factor = 21.61; Raw Q = 2.11; Noise = 2.00; Background = 50.89.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2002912
 
Submission date Oct 22, 2003
Last update date May 28, 2005
Contact name Marc E. Lenburg
E-mail(s) mlenburg@bu.edu
Phone 617-414-1375
Fax 617-414-1646
URL http://gg.bu.edu
Organization name Boston University School of Medicine
Department Genetics and Genomics
Street address 715 Albany Street, E613B
City Boston
State/province MA
ZIP/Postal code 02130
Country USA
 
Platform ID GPL97
Series (1)
GSE781 Normal and Renal Cell Carcinoma Kidney Tissue, Human

Data table header descriptions
ID_REF
VALUE MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 2022.7 P
AFFX-BioB-M_at 4447.8 P
AFFX-BioB-3_at 2776.7 P
AFFX-BioC-5_at 5795.6 P
AFFX-BioC-3_at 3943.5 P
AFFX-BioDn-5_at 5152.8 P
AFFX-BioDn-3_at 30167 P
AFFX-CreX-5_at 54920.9 P
AFFX-CreX-3_at 78495.1 P
AFFX-DapX-5_at 100.8 A
AFFX-DapX-M_at 125.2 A
AFFX-DapX-3_at 32 A
AFFX-LysX-5_at 11.4 A
AFFX-LysX-M_at 38.9 A
AFFX-LysX-3_at 27.3 A
AFFX-PheX-5_at 17.6 A
AFFX-PheX-M_at 23.2 A
AFFX-PheX-3_at 62.6 A
AFFX-ThrX-5_at 14.2 A
AFFX-ThrX-M_at 22.9 A

Total number of rows: 22645

Table truncated, full table size 399 Kbytes.




Supplementary file Size Download File type/resource
GSM12099.CEL.gz 3.1 Mb (ftp)(http) CEL

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