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GEO accession:
Sample GSM12101
Query DataSets for GSM12101
Status
Public on Nov 25, 2003
Title
C011 Renal Clear Cell Carcinoma U133B
Sample type
RNA
Source name
Trizol isolation of total RNA from Renal Clear Cell Carcinoma tissue
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Age = 55; Gender = Male; Left Kidney; Tumor Type = clear cell; Tumor Fuhrman Grade = 3; Tumor Capsule Penetration = true; Tumor Perinephric Fat Invasion = true; Tumor Renal Sinus Invasion = false; Tumor Renal Vein Invasion = false; Scaling Target = 500; Scaling Factor = 19.66; Raw Q = 3.54; Noise = 6.02; Background = 110.7.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2002912
Submission date
Oct 22, 2003
Last update date
May 28, 2005
Contact name
Marc E. Lenburg
E-mail(s)
mlenburg@bu.edu
Phone
617-414-1375
Fax
617-414-1646
URL
http://gg.bu.edu
Organization name
Boston University School of Medicine
Department
Genetics and Genomics
Street address
715 Albany Street, E613B
City
Boston
State/province
MA
ZIP/Postal code
02130
Country
USA
Platform ID
GPL97
Series (1)
GSE781
Normal and Renal Cell Carcinoma Kidney Tissue, Human
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
2953.4
P
AFFX-BioB-M_at
4844.7
P
AFFX-BioB-3_at
3102.1
P
AFFX-BioC-5_at
6535.9
P
AFFX-BioC-3_at
5676
P
AFFX-BioDn-5_at
6847.1
P
AFFX-BioDn-3_at
34951.8
P
AFFX-CreX-5_at
70127.7
P
AFFX-CreX-3_at
95756.6
P
AFFX-DapX-5_at
57.7
A
AFFX-DapX-M_at
257.5
A
AFFX-DapX-3_at
67.1
A
AFFX-LysX-5_at
46.3
A
AFFX-LysX-M_at
71.3
A
AFFX-LysX-3_at
38.3
A
AFFX-PheX-5_at
50.6
A
AFFX-PheX-M_at
226.8
A
AFFX-PheX-3_at
113.8
A
AFFX-ThrX-5_at
93.1
A
AFFX-ThrX-M_at
392.4
A
Total number of rows:
22645
Table truncated, full table size
400 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM12101.CEL.gz
3.3 Mb
(ftp)
(http)
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