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Sample GSM121242 Query DataSets for GSM121242
Status Public on Aug 18, 2006
Title Crx-Nr2e3-Nrl-ko-Gfp4W-2
Sample type RNA
 
Source name Gfp purified photoreceptors
Organism Mus musculus
Characteristics Strain: Mix 129X1/SvJ and C57BL/6J and Sjl
Gender: Mix
Age: 4Wks
Tissue: retina
Biomaterial provider Swaroop Lab
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Nugene Kit
 
Hybridization protocol Affymetrix Standard Protocol
Scan protocol Affymetrix
Description The transgenic Crx-Nr2e3-Nrl-ko-Gfp samples were compared to Nrl-ko-Gfp
at 4weeks. The Nrl-ko-Gfp data has already been submitted to GEO with series entry GSE4051
Data processing RMA normalization method was used to obtain expression scores
 
Submission date Jul 18, 2006
Last update date Aug 28, 2018
Contact name Swaroop Anand
E-mail(s) swaroop@umich.edu
Phone 734-615 2246
URL http://www.umich.edu/~retina
Organization name University of Michigan
Department Ophthalmology & Visual Sciences
Street address 1000 Wall St.
City Ann Arbor
State/province MI
ZIP/Postal code 48105
Country USA
 
Platform ID GPL1261
Series (1)
GSE5338 In vivo function of NR2E3 in establishing photoreceptor identity during mammalian retinal development
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Crx-Nr2e3-Nrl-ko-Gfp4W replicate 2, rma normalized value

Data table
ID_REF VALUE
1449132_at 5.659510871
1450830_a_at 6.338758337
1422907_at 6.764828876
1448659_at 6.083115477
1438941_x_at 4.675870771
1450766_at 6.490260664
1449421_a_at 6.480636722
1425232_x_at 6.238860203
1435857_s_at 5.519654841
1450329_a_at 7.715633968
1418552_at 5.445681166
1416306_at 5.945279632
1450080_at 5.486073662
1450966_at 4.965125601
1437687_x_at 4.492725094
1437211_x_at 7.591033787
1441144_at 8.857983653
1450779_at 7.205211243
1415840_at 7.89257165
1454926_at 9.444192594

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM121242.CEL.gz 6.4 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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