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Sample GSM121316 Query DataSets for GSM121316
Status Public on Aug 18, 2006
Title Crx-Nr2e3-Nrl-ko-Gfp4W-1
Sample type RNA
 
Source name Gfp purified photoreceptors
Organism Mus musculus
Characteristics Strain: Mix 129X1/SvJ and C57BL/6J and Sjl
Gender: Mix
Age: 4Wks
Tissue: retina
Biomaterial provider Swaroop Lab
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Nugene Kit
 
Hybridization protocol Affymetrix Standard Protocol
Scan protocol Affymetrix
Description The transgenic Crx-Nr2e3-Nrl-ko-Gfp samples were compared to Nrl-ko-Gfp
at 4weeks. The Nrl-ko-Gfp data has already been submitted to GEO with series entry GSE4051
Data processing RMA normalization method was used to obtain expression scores
 
Submission date Jul 18, 2006
Last update date Aug 28, 2018
Contact name Swaroop Anand
E-mail(s) swaroop@umich.edu
Phone 734-615 2246
URL http://www.umich.edu/~retina
Organization name University of Michigan
Department Ophthalmology & Visual Sciences
Street address 1000 Wall St.
City Ann Arbor
State/province MI
ZIP/Postal code 48105
Country USA
 
Platform ID GPL1261
Series (1)
GSE5338 In vivo function of NR2E3 in establishing photoreceptor identity during mammalian retinal development
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE CRX-p-PNR-Nrl-ko-Gfp4W replicate 1 rma normalized value

Data table
ID_REF VALUE
1449132_at 5.473473554
1450830_a_at 6.163172787
1422907_at 7.100757945
1448659_at 5.630819848
1438941_x_at 4.703394432
1450766_at 6.51196806
1449421_a_at 6.46276406
1425232_x_at 6.285542033
1435857_s_at 5.458922138
1450329_a_at 7.831307098
1418552_at 5.0202073
1416306_at 5.587106932
1450080_at 5.696164949
1450966_at 4.737896591
1437687_x_at 4.535697386
1437211_x_at 7.584497282
1441144_at 9.086801954
1450779_at 6.92320394
1415840_at 7.953967938
1454926_at 8.770777498

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM121316.CEL.gz 6.5 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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