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Sample GSM121658 Query DataSets for GSM121658
Status Public on Nov 20, 2006
Title E8.5 Wild-type embryo proper
Sample type RNA
 
Source name E8.5 Wild-type whole embryo proper
Organism Mus musculus
Characteristics Total RNA was extracted from a mixture of male and female wild-type embryos (C57BL/6_129/sv) at embryonic day 8.5.
Extracted molecule total RNA
Extraction protocol RNeasy extraction kit (QIAGEN)
Label biotin-UTP
Label protocol CodeLink Expression Bioarray System protocol
 
Hybridization protocol CodeLink Expression Bioarray System protocol
Scan protocol The arrays were scanned using an arrayWoRx Biochip Reader (Applied Precision).
Description The array image was analyzed using CodeLinkTM System Software (Amersham Biosciences).
Data processing KURABO CodeLink Expression Analysis
 
Submission date Jul 20, 2006
Last update date Oct 17, 2006
Contact name Rikiro Fukunaga
E-mail(s) fukunaga@genetic.med.osaka-u.ac.jp
Phone 81-6-6879-3318
Fax 81-6-6879-3319
URL http://www.med.osaka-u.ac.jp/pub/genetic/index.html
Organization name Osaka University
Department Grad School Frontier Biosciences
Lab Genetics
Street address 2-2 Yamadaoka
City Suita
State/province Osaka
ZIP/Postal code 565-0871
Country Japan
 
Platform ID GPL2897
Series (1)
GSE5358 p400/mDomino-deficient mouse embryo proper

Data table header descriptions
ID_REF
Raw_intensity Raw signal intensities corrected for baclground
VALUE Intensity normalized by median of spot-based raw intensity
Quality_flag G=Good, S=Saturated, L=Near background, I=Irregular, C=Background contaminated

Data table
ID_REF Raw_intensity VALUE Quality_flag
1001 1016.78 84.2831 G
1002 323.56 26.8209 G
1003 -0.07 -0.0059 L
1004 5.81 0.4814 L
1005 11 0.9118 L
1006 -0.52 -0.0429 L
1007 1050.1 87.0457 G
1008 1015.07 84.142 G
1010 62.96 5.2185 G
1012 16.33 1.3533 G
1013 5.31 0.4398 L
1014 951.18 78.8454 G
1015 1139.42 94.4497 G
1017 5.47 0.4533 L
1018 4.44 0.3678 L
1019 -0.77 -0.0636 L
1020 4.39 0.3638 L
1021 1069.88 88.6848 G
1022 1028.64 85.2669 G
1024 -1.8 -0.1492 L

Total number of rows: 36227

Table truncated, full table size 764 Kbytes.




Supplementary data files not provided

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