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Sample GSM124867 Query DataSets for GSM124867
Status Public on Oct 16, 2006
Title p53 family members in myogenic differentiation DeltaNp72 24h
Sample type RNA
 
Source name C2C12 myoblast
Organism Mus musculus
Characteristics DeltaNp72 24h
Extracted molecule total RNA
Label Biotin
Label protocol Approximately 5 ?g of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol tandard Affymetrix procedures
Description DeltaNp72 24h after differentiation
Data processing normalization on target 500
 
Submission date Aug 03, 2006
Last update date Jan 03, 2008
Contact name Christof Burek
E-mail(s) christof.burek@mail.uni-wuerzburg.de
Phone ++49 (0)931 20147696
Organization name Universitaet Wuerzburg
Department Pathologie
Lab Rosenwald
Street address Josef-schneider-Str. 2
City Wuerzburg
ZIP/Postal code 97080
Country Germany
 
Platform ID GPL1261
Series (2)
GSE5447 p53 family members in myogenic differentiation and rhabdomyosarcoma development
GSE8660 C-terminal diversity within the p53 family accounts for differences in DNA binding and transcriptional activity

Data table header descriptions
ID_REF
VALUE GCOS calculated intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M),
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 485.3 P 0.000195
AFFX-BioB-M_at 668.5 P 0.000044
AFFX-BioB-3_at 445.8 P 0.000044
AFFX-BioC-5_at 1405.5 P 0.000044
AFFX-BioC-3_at 1655 P 0.000044
AFFX-BioDn-5_at 2993.6 P 0.000044
AFFX-BioDn-3_at 5934.7 P 0.00006
AFFX-CreX-5_at 15358.9 P 0.000044
AFFX-CreX-3_at 20195.2 P 0.000044
AFFX-DapX-5_at 264 P 0.000127
AFFX-DapX-M_at 606.9 P 0.001248
AFFX-DapX-3_at 679.5 P 0.00006
AFFX-LysX-5_at 36.2 A 0.078002
AFFX-LysX-M_at 74.7 A 0.13134
AFFX-LysX-3_at 144.7 P 0.000297
AFFX-PheX-5_at 62.5 P 0.01667
AFFX-PheX-M_at 48.3 M 0.058444
AFFX-PheX-3_at 145.4 P 0.002556
AFFX-ThrX-5_at 84.5 P 0.005565
AFFX-ThrX-M_at 118 P 0.001248

Total number of rows: 45101

Table truncated, full table size 1210 Kbytes.




Supplementary data files not provided

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