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Sample GSM1252057 Query DataSets for GSM1252057
Status Public on Apr 01, 2014
Title control #6 [5535688049_C]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/+
genotype c-maf: GFP/+
age: embryonic day E18.5
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 6
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
5535688049_C.Detection Pval

Data table
ID_REF VALUE 5535688049_C.Detection Pval
ILMN_1248788 317.1277 0
ILMN_2707227 45.17018 0.01378446
ILMN_2896528 10380.56 0
ILMN_2721178 2568.228 0
ILMN_1227723 469.8991 0
ILMN_3033922 1535.154 0
ILMN_3092673 7824.402 0
ILMN_2730714 4021.156 0
ILMN_3162224 2192.354 0
ILMN_2816356 24.82496 0.0802005
ILMN_2808939 2349.765 0
ILMN_2634564 378.7644 0
ILMN_1216623 732.4492 0
ILMN_1215157 1158.206 0
ILMN_1228777 9.094696 0.2393484
ILMN_2737647 18.45547 0.1215539
ILMN_1216425 2.204986 0.3508772
ILMN_2734484 754.1429 0
ILMN_2652961 4.354248 0.3120301
ILMN_2952292 112.4164 0

Total number of rows: 25697

Table truncated, full table size 728 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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