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Sample GSM1252060 Query DataSets for GSM1252060
Status Public on Apr 01, 2014
Title Tshz1 mutant #1 [5388876091_B]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/+
genotype c-maf: GFP/delta
age: embryonic day E18.5
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
5388876091_B.Detection Pval

Data table
ID_REF VALUE 5388876091_B.Detection Pval
ILMN_1248788 128.3203 0
ILMN_2707227 20.41342 0.1015038
ILMN_2896528 6552.317 0
ILMN_2721178 1093.75 0
ILMN_1227723 251.5255 0
ILMN_3033922 1389.307 0
ILMN_3092673 6176.589 0
ILMN_2730714 3519.996 0
ILMN_3162224 2317.154 0
ILMN_2816356 24.16587 0.0726817
ILMN_2808939 1610.348 0
ILMN_2634564 316.9441 0
ILMN_1216623 616.4081 0
ILMN_1215157 1208.494 0
ILMN_1228777 -3.062696 0.4298246
ILMN_2737647 -7.882599 0.566416
ILMN_1216425 -7.125097 0.5501253
ILMN_2734484 536.6575 0
ILMN_2652961 -3.807028 0.4573935
ILMN_2952292 48.14213 0.01253133

Total number of rows: 25697

Table truncated, full table size 724 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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