GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM1252061 Query DataSets for GSM1252061
Status Public on Apr 01, 2014
Title Tshz1 mutant #2 [5388876091_D]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/+
genotype c-maf: GFP/delta
age: embryonic day E18.5
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
5388876091_D.Detection Pval

Data table
ID_REF VALUE 5388876091_D.Detection Pval
ILMN_1248788 245.13 0
ILMN_2707227 30.91642 0.05639098
ILMN_2896528 8363.646 0
ILMN_2721178 1788.418 0
ILMN_1227723 285.8726 0
ILMN_3033922 1261.468 0
ILMN_3092673 6408.084 0
ILMN_2730714 3904.687 0
ILMN_3162224 2250.102 0
ILMN_2816356 12.63069 0.1754386
ILMN_2808939 1359.115 0
ILMN_2634564 228.0735 0
ILMN_1216623 604.334 0
ILMN_1215157 1060.546 0
ILMN_1228777 2.881635 0.3070175
ILMN_2737647 4.951077 0.2694235
ILMN_1216425 -8.032469 0.5977443
ILMN_2734484 790.0706 0
ILMN_2652961 8.557739 0.2243108
ILMN_2952292 66.97594 0.006265664

Total number of rows: 25697

Table truncated, full table size 728 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap