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Sample GSM1252062 Query DataSets for GSM1252062
Status Public on Apr 01, 2014
Title Tshz1 mutant #3 [5388876091_F]
Sample type RNA
 
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/+
genotype c-maf: GFP/delta
age: embryonic day E18.5
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 3
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
 
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
ID_REF
VALUE quantile normalized
5388876091_F.Detection Pval

Data table
ID_REF VALUE 5388876091_F.Detection Pval
ILMN_1248788 146.6646 0
ILMN_2707227 36.01345 0.05012531
ILMN_2896528 9103.063 0
ILMN_2721178 1632.288 0
ILMN_1227723 276.7076 0
ILMN_3033922 1275.74 0
ILMN_3092673 5880.99 0
ILMN_2730714 3859.688 0
ILMN_3162224 2789.031 0
ILMN_2816356 25.82091 0.0839599
ILMN_2808939 1659.895 0
ILMN_2634564 288.9403 0
ILMN_1216623 524.6826 0
ILMN_1215157 786.3956 0
ILMN_1228777 6.281439 0.2756892
ILMN_2737647 1.780942 0.358396
ILMN_1216425 -12.34877 0.7343358
ILMN_2734484 731.6489 0
ILMN_2652961 -4.194209 0.4949875
ILMN_2952292 111.8371 0

Total number of rows: 25697

Table truncated, full table size 728 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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