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Sample GSM1252066 Query DataSets for GSM1252066
Status Public on Apr 01, 2014
Title Tshz1 mutant #7 [5535688049_F]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/+
genotype c-maf: GFP/delta
age: embryonic day E18.5
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 7
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
5535688049_F.Detection Pval

Data table
ID_REF VALUE 5535688049_F.Detection Pval
ILMN_1248788 68.23964 0
ILMN_2707227 34.40625 0.02130326
ILMN_2896528 11236.55 0
ILMN_2721178 1950.163 0
ILMN_1227723 388.7351 0
ILMN_3033922 1591.038 0
ILMN_3092673 6841.254 0
ILMN_2730714 3357.254 0
ILMN_3162224 2446.098 0
ILMN_2816356 13.89302 0.1340852
ILMN_2808939 1476.572 0
ILMN_2634564 259.7935 0
ILMN_1216623 621.566 0
ILMN_1215157 892.394 0
ILMN_1228777 1.482252 0.3283208
ILMN_2737647 13.29788 0.141604
ILMN_1216425 -3.174334 0.4411027
ILMN_2734484 821.543 0
ILMN_2652961 5.057604 0.2556391
ILMN_2952292 125.9836 0

Total number of rows: 25697

Table truncated, full table size 722 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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