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Sample GSM1252067 Query DataSets for GSM1252067
Status Public on Apr 01, 2014
Title Tshz1 mutant #8 [5535688049_H]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/+
genotype c-maf: GFP/delta
age: embryonic day E18.5
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 8
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
5535688049_H.Detection Pval

Data table
ID_REF VALUE 5535688049_H.Detection Pval
ILMN_1248788 416.0275 0
ILMN_2707227 29.37785 0.05137845
ILMN_2896528 8542.104 0
ILMN_2721178 1420.227 0
ILMN_1227723 291.896 0
ILMN_3033922 1526.236 0
ILMN_3092673 7037.852 0
ILMN_2730714 3816.968 0
ILMN_3162224 1927.605 0
ILMN_2816356 10.5109 0.1716792
ILMN_2808939 1913.206 0
ILMN_2634564 361.2111 0
ILMN_1216623 525.454 0
ILMN_1215157 756.3694 0
ILMN_1228777 3.201045 0.2907268
ILMN_2737647 13.36554 0.1403509
ILMN_1216425 -14.961 0.7982456
ILMN_2734484 1099.412 0
ILMN_2652961 -17.65828 0.8571429
ILMN_2952292 66.05178 0.002506266

Total number of rows: 25697

Table truncated, full table size 729 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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