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Sample GSM1252069 Query DataSets for GSM1252069
Status Public on Apr 01, 2014
Title Tshz1 mutant #2 [7018844095_D]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/Cre
genotype c-maf: flox/GFP
age: 30 days
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
7018844095_D.Detection Pval

Data table
ID_REF VALUE 7018844095_D.Detection Pval
ILMN_1248788 4.162911 0.3784461
ILMN_2707227 69.21767 0.03759398
ILMN_2896528 9342.108 0
ILMN_2721178 2379.498 0
ILMN_1227723 226.4458 0.001253133
ILMN_3033922 2206.846 0
ILMN_3092673 8812.895 0
ILMN_2730714 7473.823 0
ILMN_3162224 1280.06 0
ILMN_2816356 0.09853926 0.4448622
ILMN_2808939 921.4116 0
ILMN_2634564 479.5511 0
ILMN_1216623 1249.353 0
ILMN_1215157 1293.221 0
ILMN_1228777 17.64973 0.2055138
ILMN_2737647 12.24541 0.2531328
ILMN_1216425 -9.342401 0.6716792
ILMN_2734484 1447.537 0
ILMN_2652961 -6.603992 0.6052632
ILMN_2952292 190.9386 0.005012531

Total number of rows: 25697

Table truncated, full table size 754 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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