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Sample GSM1252070 Query DataSets for GSM1252070
Status Public on Apr 01, 2014
Title Tshz1 mutant #3 [7018844095_F]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/Cre
genotype c-maf: flox/GFP
age: 30 days
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 3
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
7018844095_F.Detection Pval

Data table
ID_REF VALUE 7018844095_F.Detection Pval
ILMN_1248788 -1.246631 0.4661654
ILMN_2707227 35.60183 0.09273183
ILMN_2896528 5160.318 0
ILMN_2721178 2206.846 0
ILMN_1227723 154.0535 0.002506266
ILMN_3033922 2150.686 0
ILMN_3092673 5493.638 0
ILMN_2730714 5486.81 0
ILMN_3162224 2080.456 0
ILMN_2816356 20.25457 0.1704261
ILMN_2808939 1269.015 0
ILMN_2634564 417.1449 0
ILMN_1216623 829.4278 0
ILMN_1215157 1415.501 0
ILMN_1228777 21.14533 0.1654135
ILMN_2737647 26.94045 0.131579
ILMN_1216425 -3.764014 0.5238096
ILMN_2734484 1062.807 0
ILMN_2652961 -9.110111 0.6654136
ILMN_2952292 150.5587 0.002506266

Total number of rows: 25697

Table truncated, full table size 750 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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