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Sample GSM1252074 Query DataSets for GSM1252074
Status Public on Apr 01, 2014
Title Tshz1 mutant #7 [7018844099_F]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/Cre
genotype c-maf: flox/GFP
age: 30 days
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 7
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
7018844099_F.Detection Pval

Data table
ID_REF VALUE 7018844099_F.Detection Pval
ILMN_1248788 40.24472 0.05764411
ILMN_2707227 25.71878 0.09774436
ILMN_2896528 7456.075 0
ILMN_2721178 2301.727 0
ILMN_1227723 212.4313 0
ILMN_3033922 1920.08 0
ILMN_3092673 8385.513 0
ILMN_2730714 5345.616 0
ILMN_3162224 1007.953 0
ILMN_2816356 -19.50814 0.906015
ILMN_2808939 866.1848 0
ILMN_2634564 372.1711 0
ILMN_1216623 778.1277 0
ILMN_1215157 1984.427 0
ILMN_1228777 34.89677 0.0651629
ILMN_2737647 -5.354498 0.5263158
ILMN_1216425 1.215889 0.3822055
ILMN_2734484 1093.75 0
ILMN_2652961 -9.756508 0.6566416
ILMN_2952292 216.1703 0

Total number of rows: 25697

Table truncated, full table size 748 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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