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Sample GSM1252077 Query DataSets for GSM1252077
Status Public on Apr 01, 2014
Title control #2 [7018844095_C]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/Cre
genotype c-maf: flox/+
age: 30 days
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
7018844095_C.Detection Pval

Data table
ID_REF VALUE 7018844095_C.Detection Pval
ILMN_1248788 4.171572 0.3734336
ILMN_2707227 31.63826 0.1591479
ILMN_2896528 5447.84 0
ILMN_2721178 3246.801 0
ILMN_1227723 536.2206 0
ILMN_3033922 2132.11 0
ILMN_3092673 9083.712 0
ILMN_2730714 6052.061 0
ILMN_3162224 1437.201 0
ILMN_2816356 -7.014403 0.6315789
ILMN_2808939 1670.495 0
ILMN_2634564 531.525 0
ILMN_1216623 927.4693 0
ILMN_1215157 1127.219 0
ILMN_1228777 -4.123864 0.5626566
ILMN_2737647 13.62964 0.2531328
ILMN_1216425 -0.996259 0.4824561
ILMN_2734484 1402.703 0
ILMN_2652961 -4.264578 0.566416
ILMN_2952292 150.3784 0.01629073

Total number of rows: 25697

Table truncated, full table size 767 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

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