GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM1252080 Query DataSets for GSM1252080
Status Public on Apr 01, 2014
Title control #5 [7018844099_A]
Sample type RNA
Source name mouse olfactory bulb
Organism Mus musculus
Characteristics strain: C57/BL6;129/Ola; CD1 mixed
genotype isl1: +/Cre
genotype c-maf: flox/+
age: 30 days
tissue: olfactory bulb
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 5
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
Submission date Oct 28, 2013
Last update date Apr 01, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platform ID GPL6885
Series (1)
GSE51761 Genome-wide expression analysis of E18.5 and P30 olfactory bulbs of control and Tshz1 mutant mice

Data table header descriptions
VALUE quantile normalized
7018844099_A.Detection Pval

Data table
ID_REF VALUE 7018844099_A.Detection Pval
ILMN_1248788 -7.98805 0.6165413
ILMN_2707227 30.13102 0.1065163
ILMN_2896528 5493.638 0
ILMN_2721178 3020.653 0
ILMN_1227723 251.7555 0
ILMN_3033922 2225.951 0
ILMN_3092673 10656.52 0
ILMN_2730714 6222.868 0
ILMN_3162224 920.3235 0
ILMN_2816356 -16.16256 0.8421053
ILMN_2808939 770.0805 0
ILMN_2634564 382.2461 0
ILMN_1216623 553.6921 0
ILMN_1215157 1594.271 0
ILMN_1228777 17.2833 0.1879699
ILMN_2737647 19.24666 0.1729323
ILMN_1216425 -10.62935 0.7042606
ILMN_2734484 1256.518 0
ILMN_2652961 -10.13255 0.6879699
ILMN_2952292 102.7255 0.006265664

Total number of rows: 25697

Table truncated, full table size 747 Kbytes.

Supplementary data files not provided
Processed data included within Sample table
Raw data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap