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Sample GSM1263325 Query DataSets for GSM1263325
Status Public on Nov 14, 2013
Title WT Treg
Sample type RNA
 
Source name WT B6 spleen
Organism Mus musculus
Characteristics genotype: WT
genetic background: C57BL/6
cell type: CD4+ CD25+ GITR+ (Treg) cells
Extracted molecule total RNA
Extraction protocol Rneasy RNA extraction kit (Qiagen) was used.
Label biotin-16-UTP
Label protocol Labeling procedures were carred out according to the standard protocol from Illumina.
 
Hybridization protocol hybridization and wash were done according to the Illumina's manual. (Hyb:Incubation at 58c for at least 14 hours)
Scan protocol by Illumina iScan
Description Gene expression
male, WT B6, 6 week old
Data processing GeneSpring
 
Submission date Nov 13, 2013
Last update date Nov 14, 2013
Contact name Eui Ho Kim
E-mail(s) ekim38@wisc.edu
Phone 608-263-4715
Organization name University of Wisconsin-Madison
Department Pathobiological Sciences
Lab Dr. M. Suresh
Street address 2015 Linden Dr.
City Madison
State/province Wisconsin
ZIP/Postal code 53706
Country USA
 
Platform ID GPL6885
Series (1)
GSE52337 mRNA expression in CD4+ CD25+ GITR+ regulatory T cells from WT and Bach2 KO mice

Data table header descriptions
ID_REF
VALUE Percentile shift normalization by GeneSpring software
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2601.528 0
ILMN_2721178 364.85 0
ILMN_3033922 421.1198 0
ILMN_3092673 3599.893 0
ILMN_2816356 113.1965 0.01879699
ILMN_2808939 887.7857 0
ILMN_2634564 528.9616 0
ILMN_2737647 89.55382 0.2869674
ILMN_2734484 324.8259 0
ILMN_2952292 124.1079 0.003759399
ILMN_2699078 88.33464 0.3233083
ILMN_1213681 298.0154 0
ILMN_2735413 97.4056 0.1365915
ILMN_2735415 82.39143 0.5889724
ILMN_2891688 2757.624 0
ILMN_2637698 1201.257 0
ILMN_2674228 490.3745 0
ILMN_2601546 90.39146 0.264411
ILMN_1230831 108.5811 0.03884712
ILMN_2848071 125.2367 0.003759399

Total number of rows: 25697

Table truncated, full table size 724 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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