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Status
Public on Mar 16, 2004
Title
laminin binding germ cells GPL341
Sample type
RNA
Source name
germ cells from 22 day old rat testis, cultured
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
50 ng total RNA were amplified using two rounds of amplification. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 1.028).
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL341 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
299.1
P
0.001593
AFFX-BioB-M_at
432.8
P
0.000044
AFFX-BioB-3_at
235.8
P
0.000052
AFFX-BioC-5_at
634.8
P
0.000044
AFFX-BioC-3_at
420.4
P
0.000052
AFFX-BioDn-5_at
739.6
P
0.000258
AFFX-BioDn-3_at
2495.1
P
0.000044
AFFX-CreX-5_at
7471.7
P
0.000044
AFFX-CreX-3_at
8273.1
P
0.000044
AFFX-DapX-5_at
19.3
A
0.089478
AFFX-DapX-M_at
20.8
A
0.123572
AFFX-DapX-3_at
2.3
A
0.737173
AFFX-LysX-5_at
2.5
A
0.843268
AFFX-LysX-M_at
21.7
A
0.185131
AFFX-LysX-3_at
9.2
A
0.287743
AFFX-PheX-5_at
3.6
A
0.945787
AFFX-PheX-M_at
0.9
A
0.937071
AFFX-PheX-3_at
29.2
A
0.300606
AFFX-ThrX-5_at
6.5
A
0.617401
AFFX-ThrX-M_at
3.2
A
0.58862
15923 422 Kbytes .Supplementary file Size Download File type/resource GSM12811.CEL.gz
2.5 Mb
(ftp) (http) CEL
