|
| Status |
Public on Jun 13, 2008 |
| Title |
NbPBS_24HRS_rep03 |
| Sample type |
RNA |
| |
|
| Source name |
Nb infected pbs challenge 24hrs
|
| Organism |
Mus musculus |
| Characteristics |
'strain:BALB/c WT', 'gender:male', 'age:8wks', 'tissue: whole lung', 'condition: Nb infected pbs challenge 24hrs'
|
| Extracted molecule |
total RNA |
| Extraction protocol |
trizol extraction followed by qiagen RNeasy total RNA cleanup protocol
|
| Label |
biotin
|
| Label protocol |
standard Affymetrix procedures
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures using affy GCS3000
|
| Description |
Intensity of hybridization for each probe pair was computed by GCOS 1.2 software (Affymetrix). (For more detailed methods, please refer to the website of the Malaria Research Institute Gene Array Core Facility (MRI-GACF) at the Johns Hopkins Bloomberg School of Public Health http://jhmmi.jhsph.edu)
|
| Data processing |
Affymetrix Microarray Suite version 5.0
|
| |
|
| Submission date |
Aug 16, 2006 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Joshua J Reece |
| E-mail(s) |
josh.reece@gmail.com
|
| Organization name |
Johns Hopkins University BSPH
|
| Department |
MMI
|
| Lab |
Lab of Alan Scott
|
| Street address |
615 N. Wolfe Street
|
| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21205 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (1) |
| GSE5555 |
Hookworm-Induced Persistent Changes to the Immunological Environment of the Lung |
|
| Relations |
| Reanalyzed by |
GSE119085 |
