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Sample GSM1314044 Query DataSets for GSM1314044
Status Public on Mar 01, 2014
Title Heart_KO_Rep1
Sample type RNA
 
Source name Heart_KO
Organism Mus musculus
Characteristics strain background: C57BL/6J
gender: female
age: 20 wks
genotype/variation: Nelf-b f/f; CreER
tissue: heart
Treatment protocol fasting for 5 hours
Growth protocol Regular Chow
Extracted molecule total RNA
Extraction protocol miRNeasy mini kit (Qiagen, Cat. #217004)
Label Biotin
Label protocol TotalPrepTM RNA amplification kit (Ambion, Cat. #AMIL1791)
 
Hybridization protocol MouseRef-8 version 2.0, Illumina
Scan protocol BeadChips were scanned on a BeadArrayTM Reader (Illumina) using BeadScan software (version 3.2, Illumina)
Data processing the scanned data were uploaded into GenomeStudio® software (version 1.1, Illumina) via the gene expression module (Direct Hyb).
 
Submission date Jan 24, 2014
Last update date Mar 01, 2014
Contact name Haihui Pan
E-mail(s) panh@livemail.uthscsa.edu
Phone 210-562-4159
Organization name University of Texas Health Science Center at San Antonio
Department Molecular Medicine
Lab Dr. Rong Li
Street address 8403 Floyd Curl Dr.
City San Antonio
State/province Texas
ZIP/Postal code 78229
Country USA
 
Platform ID GPL6885
Series (1)
GSE54372 Heart tissue from Nelf-b CreER mice

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2578.104 0
ILMN_2721178 728.194 0
ILMN_3033922 439.9829 0
ILMN_3092673 2080.059 0
ILMN_2816356 90.52775 0.5839599
ILMN_2808939 155.3989 0
ILMN_2634564 158.6131 0
ILMN_2737647 99.51286 0.1077694
ILMN_2734484 255.8888 0
ILMN_2952292 114.6096 0.01002506
ILMN_2699078 92.82935 0.39599
ILMN_1213681 710.3696 0
ILMN_2735413 88.12 0.7807018
ILMN_2735415 92.97442 0.3822055
ILMN_2891688 514.6381 0
ILMN_2637698 561.1155 0
ILMN_2674228 189.2635 0
ILMN_2601546 90.40972 0.5952381
ILMN_1230831 88.11166 0.7807018
ILMN_2848071 95.22409 0.2443609

Total number of rows: 25696

Table truncated, full table size 752 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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