NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1314046 Query DataSets for GSM1314046
Status Public on Mar 01, 2014
Title Heart_KO_Rep3
Sample type RNA
 
Source name Heart_KO
Organism Mus musculus
Characteristics strain background: C57BL/6J
gender: female
age: 20 wks
genotype/variation: Nelf-b f/f; CreER
tissue: heart
Treatment protocol fasting for 5 hours
Growth protocol Regular Chow
Extracted molecule total RNA
Extraction protocol miRNeasy mini kit (Qiagen, Cat. #217004)
Label Biotin
Label protocol TotalPrepTM RNA amplification kit (Ambion, Cat. #AMIL1791)
 
Hybridization protocol MouseRef-8 version 2.0, Illumina
Scan protocol BeadChips were scanned on a BeadArrayTM Reader (Illumina) using BeadScan software (version 3.2, Illumina)
Data processing the scanned data were uploaded into GenomeStudio® software (version 1.1, Illumina) via the gene expression module (Direct Hyb).
 
Submission date Jan 24, 2014
Last update date Mar 01, 2014
Contact name Haihui Pan
E-mail(s) panh@livemail.uthscsa.edu
Phone 210-562-4159
Organization name University of Texas Health Science Center at San Antonio
Department Molecular Medicine
Lab Dr. Rong Li
Street address 8403 Floyd Curl Dr.
City San Antonio
State/province Texas
ZIP/Postal code 78229
Country USA
 
Platform ID GPL6885
Series (1)
GSE54372 Heart tissue from Nelf-b CreER mice

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2719.846 0
ILMN_2721178 999.3965 0
ILMN_3033922 506.3327 0
ILMN_3092673 2096.586 0
ILMN_2816356 92.26354 0.4636591
ILMN_2808939 152.8369 0
ILMN_2634564 190.063 0
ILMN_2737647 96.41348 0.2293233
ILMN_2734484 218.2535 0
ILMN_2952292 96.84434 0.2030075
ILMN_2699078 96.57493 0.216792
ILMN_1213681 734.2466 0
ILMN_2735413 100.1799 0.1190476
ILMN_2735415 87.90854 0.8095238
ILMN_2891688 469.1878 0
ILMN_2637698 533.8528 0
ILMN_2674228 226.0078 0
ILMN_2601546 85.46769 0.9310777
ILMN_1230831 82.2504 0.9874687
ILMN_2848071 88.22635 0.7857143

Total number of rows: 25696

Table truncated, full table size 741 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap