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Sample GSM13175 Query DataSets for GSM13175
Status Public on Dec 04, 2003
Title Duodenum 3B
Sample type RNA
 
Source name Whole segment, duodenum, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) Pascale.Anderle@isrec.unil.ch
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL82
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
LN_D3_ADI nat. log transformed MAS5 data
LN_D3_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE LN_D3_ADI LN_D3_ADI_Norm
AFFX-MurIL2_at 30.4 3.414 3.196
AFFX-MurIL10_at 181.2 5.2 5.136
AFFX-MurIL4_at 16.7 2.815 2.648
AFFX-MurFAS_at 176.3 5.172 5.183
AFFX-BioB-5_at 1083.6 6.988 7.026
AFFX-BioB-M_at 2034.3 7.618 7.636
AFFX-BioB-3_at 2002.2 7.602 7.629
AFFX-BioC-5_at 3401.8 8.132 8.106
AFFX-BioC-3_at 2872.2 7.963 7.96
AFFX-BioDn-5_at 3289.7 8.099 8.087
AFFX-BioDn-3_at 14419.4 9.576 9.404
AFFX-CreX-5_at 36861.5 10.515 10.259
AFFX-CreX-3_at 54053.8 10.898 10.601
AFFX-BioB-5_st 282.5 5.644 5.656
AFFX-BioB-M_st 287.5 5.661 5.664
AFFX-BioB-3_st 111.9 4.718 4.667
AFFX-BioC-5_st 96.3 4.567 4.464
AFFX-BioC-3_st 143 4.963 4.866
AFFX-BioDn-5_st 263.4 5.574 5.591
AFFX-BioDn-3_st 397.6 5.985 6.008

Total number of rows: 12477

Table truncated, full table size 334 Kbytes.




Supplementary data files not provided

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