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Sample GSM13183 Query DataSets for GSM13183
Status Public on Dec 04, 2003
Title Colon 1C
Sample type RNA
 
Source name Whole segment, colon, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) Pascale.Anderle@isrec.unil.ch
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL83
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
LN_C1_ADI nat. log transformed MAS5 data
LN_C1_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE LN_C1_ADI LN_C1_ADI_Norm
AFFX-MurIL2_at 167 5.118 5.013
AFFX-MurIL10_at 61.3 4.116 4.013
AFFX-MurIL4_at 80.7 4.391 4.285
AFFX-MurFAS_at 198.1 5.289 5.229
AFFX-BioB-5_at 805.5 6.691 6.785
AFFX-BioB-M_at 1018.6 6.926 7.067
AFFX-BioB-3_at 1183.4 7.076 7.237
AFFX-BioC-5_at 1879.1 7.539 7.743
AFFX-BioC-3_at 2005.3 7.604 7.802
AFFX-BioDn-5_at 1554 7.349 7.539
AFFX-BioDn-3_at 7517 8.925 9.344
AFFX-CreX-5_at 15577.4 9.654 10.177
AFFX-CreX-3_at 23889.8 10.081 10.645
AFFX-BioB-5_st 471.5 6.156 6.148
AFFX-BioB-M_st 385.8 5.955 5.91
AFFX-BioB-3_st 73.8 4.301 4.203
AFFX-BioC-5_st 70.1 4.25 4.146
AFFX-BioC-3_st 24.4 3.195 3.09
AFFX-BioDn-5_st 241.6 5.487 5.385
AFFX-BioDn-3_st 90.3 4.503 4.461

Total number of rows: 11934

Table truncated, full table size 324 Kbytes.




Supplementary data files not provided

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