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Sample GSM1319642 Query DataSets for GSM1319642
Status Public on Jan 31, 2015
Title 131I_thyroid_C
Sample type RNA
 
Source name Mouse thyroid, 17 Gy, 24h
Organism Mus musculus
Characteristics strain: Balb/c
tissue: thyroid
absorbed dose: 17 Gy
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Jan 31, 2014
Last update date Jan 31, 2015
Contact name Nils Rudqvist
E-mail(s) nils.rudqvist@radfys.gu.se
Organization name Gothenburg university
Street address Gula stråket 2b
City Göteborg
State/province VG
ZIP/Postal code 41345
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE54594 Dose-specific transcriptional responses in thyroid tissue in mice after 131I administration

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2659724 115.5625 0.01910828
ILMN_2706226 86.75 0.9770701
ILMN_1217123 117.1875 0.011464968
ILMN_2780205 4014.5 0
ILMN_2713160 93.75 0.7388535
ILMN_2650094 92.6875 0.79617834
ILMN_2703479 97.9375 0.49171975
ILMN_2952493 103.0625 0.25859872
ILMN_2731592 115.0625 0.028025478
ILMN_2729743 266.75 0
ILMN_1252621 206.4375 0
ILMN_3162407 1023.25 0
ILMN_2692952 104.625 0.2089172
ILMN_2910076 100.6875 0.36815286
ILMN_2709047 183.5 0
ILMN_2718462 166.375 0
ILMN_2882078 238.3125 0
ILMN_2882079 141.125 0
ILMN_2771368 103.875 0.2089172
ILMN_2724039 86.625 0.9770701

Total number of rows: 25697

Table truncated, full table size 703 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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