|
| Status |
Public on Dec 05, 2014 |
| Title |
Liver tissue from mice fed with a sucrose-containing diet for 22 weeks, biological replicate 3 |
| Sample type |
RNA |
| |
|
| Source name |
Liver tissue
|
| Organism |
Mus musculus |
| Characteristics |
treatment: sucrose
tissue: liver
age: 18 weeks
strain: C57Bl/6J
gender: male
|
| Treatment protocol |
Isocaloric diets containing either sucrose or palatinose as described in the paper
|
| Growth protocol |
Animals housed under spf conditions
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNeasy Mini Kit (Qiagen) including DNase treatment
|
| Label |
Biotin
|
| Label protocol |
Illumina TotalPrep RNA Amplification kit (Ambion)
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
Gene expression data from liver tissue from mice fed with a sucrose-containing diet for 22 weeks, biological replicate 3
|
| Data processing |
Data including background subtraction (GenomeStudioV2011.1 software, gene expression module version 1.9.0), removal of negative values by introducing an offset, quantile normalisation
|
| |
|
| Submission date |
Feb 06, 2014 |
| Last update date |
Dec 05, 2014 |
| Contact name |
Johannes Beckers |
| E-mail(s) |
johannes.beckers@helmholtz-munich.de
|
| Organization name |
Helmholtz Zentrum Muenchen
|
| Department |
Institute of Experimental Genetics
|
| Street address |
Ingolstaedter Landstr. 1
|
| City |
Neuherberg |
| ZIP/Postal code |
85764 |
| Country |
Germany |
| |
|
| Platform ID |
GPL6885 |
| Series (1) |
| GSE54723 |
Nutritional Strategy to Prevent Fatty Liver and Insulin Resistance Independent of Obesity by Reducing GIP Responses |
|
