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Sample GSM1332325 Query DataSets for GSM1332325
Status Public on Jul 02, 2014
Title 2 Ctrl 2
Sample type RNA
Source name Alveolar type 2 cells_control
Organism Rattus norvegicus
Characteristics strain background: Sprague Dawley
gender: male
diet: isocaloric control diet without EtOH for 6wks
sample group: Control
cell type: Alveolar type 2 cells
Treatment protocol Alveolar type 2 cells were isolated using an immunoabsorption technique.
Growth protocol Male Spargue Dawley rats were fed the liquid Lieber-DeCarlie diet containg EtOH for 6 wk or an isocaloric control diet without EtOH.
Extracted molecule total RNA
Extraction protocol RNA was extracted by Trizol.
Label biotin
Label protocol Biotinylation of RNA was completed as described in the Affymetrix user manual.
Hybridization protocol Standard Affymetrix hybridization protocol
Scan protocol Mouse Genome 430 2.0 GeneChips were scanned using the Affymetrix 3000 scanner/AGCC.
Description 2 Ctrl 2.CEL
Data processing Data were analyzed by GeneSpring GX.
Submission date Feb 21, 2014
Last update date Jul 02, 2014
Contact name Gregory Doho
Organization name Emory University
Street address 1365B Clifton Rd NE
City Atlanta
State/province GA
ZIP/Postal code 30322
Country USA
Platform ID GPL85
Series (1)
GSE55243 Genomic Microarray of Rat Alveolar Type 2 cells Following Chronic Ethanol Ingestion

Data table header descriptions
VALUE normalized

Data table
A01157cds_s_at 3.86843
A03913cds_s_at 4.33741
A04674cds_s_at 4.27722
A07543cds_s_at 5.20101
A09811cds_s_at 4.87982
A16585cds_s_at 4.20856
A17753cds_s_at 4.81518
A30543cds_s_at 3.04012
A44407cds_at 3.9044
AA108277_at 3.437
AA108308_i_at 2.6936
AA108308_s_at 5.92938
AA684537_at 4.36691
AA684929_f_at 5.90042
AA684960_f_at 5.99469
AA684963_at 4.77702
AA685112_at 3.67871
AA685152_r_at 3.47847
AA685376_f_at 5.19019
AA685876_at 6.12501

Total number of rows: 8799

Table truncated, full table size 182 Kbytes.

Supplementary file Size Download File type/resource
GSM1332325_2_Ctrl_2.CEL.gz 1.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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