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Sample GSM1337305 Query DataSets for GSM1337305
Status Public on Mar 05, 2014
Title Normal, synovial membrane patient EB_184 (U133A)
Sample type RNA
 
Source name synovial membrane patient EB_184 (normal controls)
Organism Homo sapiens
Characteristics gender: male
age: 64
clinical status: normal control
Treatment protocol none
Extracted molecule total RNA
Extraction protocol according RNeasy Kit, Qiagen
Label biotin
Label protocol according to supplier instructions, Affymetrix
 
Hybridization protocol according to supplier instructions, Affymetrix
Scan protocol by laser scanning (Hewlett Packard gene scanner)
Description see publication for details
EB_184
Data processing background corrected signal intensities were determined using the MAS 5.0 software (Affymetrix)
MAS5.0 signal intensity, ABS_CALL: presence/absence call, DETECTION P-VALUE: significance of 0-hypothesis (not expressed)
 
Submission date Feb 28, 2014
Last update date Mar 05, 2014
Contact name Raimund W Kinne
E-mail(s) raimund.w.kinne@med.uni-jena.de
Phone +49 36691 81228
Organization name Jena University Hospital
Department Department of Orthopedics
Lab Experimental Rheumatology Unit, Waldkrankenhaus Rudolf Elle
Street address Klosterlausnitzer Str. 81
City Eisenberg
ZIP/Postal code 07607
Country Germany
 
Platform ID GPL96
Series (1)
GSE55457 Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation [Jena]

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1007_s_at 380.9 P 0.008689
1053_at 164.6 P 0.014937
117_at 607.4 P 0.000468
121_at 1049.8 P 0.002617
1255_g_at 38 A 0.35869
1294_at 722.1 P 0.001141
1316_at 78.7 P 0.011447
1320_at 13.6 A 0.732537
1405_i_at 207.4 P 0.000762
1431_at 58.5 P 0.021866
1438_at 32.8 A 0.561639
1487_at 576.3 P 0.031336
1494_f_at 246.1 P 0.013092
1598_g_at 5368.1 P 0.000219
160020_at 1267 P 0.006532
1729_at 691.1 P 0.000673
177_at 227.8 P 0.00418
1773_at 127.5 A 0.107301
179_at 680.4 A 0.107301
1861_at 262.2 P 0.006532

Total number of rows: 22283

Table truncated, full table size 593 Kbytes.




Supplementary file Size Download File type/resource
GSM1337305_EB_184.CEL.gz 3.4 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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