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Sample GSM1340473 Query DataSets for GSM1340473
Status Public on Mar 08, 2014
Title WT unsort rep 3
Sample type RNA
 
Source name WT unsort
Organism Mus musculus
Characteristics gender: Female
tissue type: mammary gland
cell population: Unsorted
genotype/variation: SNAI2+/+
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol not provided
 
Hybridization protocol not provided
Scan protocol not provided
Description W3_Unsorted
Data processing The data were normalised using quantile normalization
 
Submission date Mar 05, 2014
Last update date Mar 08, 2014
Contact name Charlotte Kuperwasser
Phone 6176365644
Organization name Tufts University
Street address 75 Kneeland St
City Boston
ZIP/Postal code 02111
Country USA
 
Platform ID GPL6885
Series (1)
GSE55620 Genome Wide Expression of Mammary Epithelial Populations in Slug (SNAI2) WT vs Slug Null Mice

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection P value

Data table
ID_REF VALUE Detection P value
ILMN_2896528 281.2961 0
ILMN_2721178 185.9227 0.001253133
ILMN_3033922 217.6295 0.001253133
ILMN_3092673 706.9675 0
ILMN_2816356 102.506 0.09273183
ILMN_2808939 250.4726 0
ILMN_2634564 483.3621 0
ILMN_2737647 96.53717 0.2468672
ILMN_2734484 126.7416 0.003759399
ILMN_2952292 118.4752 0.0112782
ILMN_2699078 194.4924 0.001253133
ILMN_1213681 151.7764 0.002506266
ILMN_2735413 94.20663 0.3634085
ILMN_2735415 95.83658 0.2781955
ILMN_2891688 220.5109 0.001253133
ILMN_2637698 238.1554 0.001253133
ILMN_2674228 93.26025 0.4335839
ILMN_2601546 104.6832 0.05764411
ILMN_1230831 104.5513 0.05889724
ILMN_2848071 111.7426 0.02005013

Total number of rows: 25697

Table truncated, full table size 774 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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