NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1340474 Query DataSets for GSM1340474
Status Public on Mar 08, 2014
Title null unsort rep 1
Sample type RNA
 
Source name null unsort
Organism Mus musculus
Characteristics gender: Female
tissue type: mammary gland
cell population: Unsorted
genotype/variation: SNAI2 null
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol not provided
 
Hybridization protocol not provided
Scan protocol not provided
Description N1_Unsorted
Data processing The data were normalised using quantile normalization
 
Submission date Mar 05, 2014
Last update date Mar 08, 2014
Contact name Charlotte Kuperwasser
Phone 6176365644
Organization name Tufts University
Street address 75 Kneeland St
City Boston
ZIP/Postal code 02111
Country USA
 
Platform ID GPL6885
Series (1)
GSE55620 Genome Wide Expression of Mammary Epithelial Populations in Slug (SNAI2) WT vs Slug Null Mice

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection P value

Data table
ID_REF VALUE Detection P value
ILMN_2896528 362.0183 0
ILMN_2721178 191.4934 0.001253133
ILMN_3033922 170.2663 0.001253133
ILMN_3092673 488.2413 0
ILMN_2816356 119.7902 0.00877193
ILMN_2808939 249.743 0.001253133
ILMN_2634564 534.6017 0
ILMN_2737647 95.18479 0.3358396
ILMN_2734484 141.1119 0.003759399
ILMN_2952292 118.2558 0.01002506
ILMN_2699078 204.5156 0.001253133
ILMN_1213681 239.8154 0.001253133
ILMN_2735413 95.88432 0.302005
ILMN_2735415 100.2316 0.1378446
ILMN_2891688 200.5554 0.001253133
ILMN_2637698 222.815 0.001253133
ILMN_2674228 97.34138 0.2343358
ILMN_2601546 113.0879 0.01503759
ILMN_1230831 103.4858 0.0877193
ILMN_2848071 118.5772 0.00877193

Total number of rows: 25697

Table truncated, full table size 775 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap