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Sample GSM1342769 Query DataSets for GSM1342769
Status Public on Mar 06, 2017
Title Disease_2
Sample type RNA
 
Source name Liver_diseased
Organism Mus musculus
Characteristics tk: Neg
tissue: liver
disease status: CCL4-induced fibrosis
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description CCl4 Treatment
Data processing GenomeStudio
 
Submission date Mar 10, 2014
Last update date Mar 06, 2017
Contact name Travis Hardcastle
E-mail(s) twhardcastle@mdanderson.org
Organization name MD Anderson Cancer Center
Department Cancer Biology
Lab Kalluri Lab
Street address 1901 East Rd.
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL6885
Series (1)
GSE55747 Gene Expression Analysis of Fibrotic Liver

Data table header descriptions
ID_REF
VALUE Rank Invariant Background Subtracted Signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212607 -8.2 0.89724
ILMN_1212612 14.1 0.02757
ILMN_1212619 -10.5 0.97744
ILMN_1212628 -4 0.54762
ILMN_1212632 39 0
ILMN_1212636 1682.7 0
ILMN_1212637 1920.2 0
ILMN_1212645 3135.9 0
ILMN_1212648 53.3 0
ILMN_1212653 49.2 0
ILMN_1212672 222.5 0
ILMN_1212682 -0.2 0.26692
ILMN_1212683 -5 0.65414
ILMN_1212685 -11.2 0.98872
ILMN_1212692 6.9 0.10025
ILMN_1212693 104.3 0
ILMN_1212695 2.8 0.17293
ILMN_1212698 -6.5 0.7782
ILMN_1212702 3272.1 0
ILMN_1212703 75.9 0

Total number of rows: 25697

Table truncated, full table size 592 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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