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Sample GSM1342776 Query DataSets for GSM1342776
Status Public on Mar 06, 2017
Title aSMA_3
Sample type RNA
 
Source name Liver_aSMA
Organism Mus musculus
Characteristics tk: aSMA +
tissue: liver
disease status: CCL4-induced fibrosis
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description CCl4 Treatment
Data processing GenomeStudio
 
Submission date Mar 10, 2014
Last update date Mar 06, 2017
Contact name Travis Hardcastle
E-mail(s) twhardcastle@mdanderson.org
Organization name MD Anderson Cancer Center
Department Cancer Biology
Lab Kalluri Lab
Street address 1901 East Rd.
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL6885
Series (1)
GSE55747 Gene Expression Analysis of Fibrotic Liver

Data table header descriptions
ID_REF
VALUE Rank Invariant Background Subtracted Signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212607 3.6 0.4599
ILMN_1212612 34.9 0.00376
ILMN_1212619 -4.6 0.97243
ILMN_1212628 8.4 0.20301
ILMN_1212632 40.2 0.00125
ILMN_1212636 1962.7 0
ILMN_1212637 1761.4 0
ILMN_1212645 4851.5 0
ILMN_1212648 84.5 0
ILMN_1212653 32.2 0.00627
ILMN_1212672 200.1 0
ILMN_1212682 8 0.21303
ILMN_1212683 -1.7 0.87218
ILMN_1212685 -3.7 0.95363
ILMN_1212692 9.8 0.17293
ILMN_1212693 237.3 0
ILMN_1212695 5.9 0.30827
ILMN_1212698 -3.5 0.94737
ILMN_1212702 6667.3 0
ILMN_1212703 143.5 0

Total number of rows: 25697

Table truncated, full table size 591 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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