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Sample GSM135544 Query DataSets for GSM135544
Status Public on Dec 19, 2007
Title SAGE_pituitary_adrenalectomized male mice
Sample type SAGE
Anchor NlaIII
Tag Count 59999
Tag Length 10
 
Source name pituitary
Organism Mus musculus
Characteristics C57BL/6, male, 12-14 wk
Extracted molecule total RNA
 
Description Pituitary gland were dissected from C57BL6 male mice and pooled together. Total RNA was isolated by Trizol.
 
Submission date Sep 09, 2006
Last update date Nov 19, 2008
Contact name Yuichiro Nishida
E-mail(s) ynishida88@hotmail.com
Phone (717) 531-1028
Fax (717) 531-1792
Organization name Penn State College of Medicine
Department Department of Anatomy and Physiology
Lab Dr. Ray's Lab
Street address 500 University Drive
City Hershey
State/province PA
ZIP/Postal code 17033
Country USA
 
Platform ID GPL11
Series (1)
GSE5879 Regulation of pituitary gene expression by adrenalectomy

Data table header descriptions
TAG
COUNT
TPM tags per million
PERCENT

Data table
TAG COUNT TPM PERCENT
AAGTGTCGCC 10902 181703.03 18.170303
GGCGAGCTGA 2154 35900.60 3.59006
ATCAACACCG 503 8383.47 0.838347
GGGGGAGTGG 486 8100.14 0.810014
CTTGGGTGCA 400 6666.78 0.666678
GTGGCTCACA 377 6283.44 0.628344
CTGTGTGGCC 299 4983.42 0.498342
CCTTTAATCC 280 4666.74 0.466674
AGGCAGACAG 251 4183.40 0.41834
CGCAGCGACG 247 4116.74 0.411674
TTGGCGTCAA 217 3616.73 0.361673
GCTGGGGCCC 160 2666.71 0.266671
ACCTCCGAGA 144 2400.04 0.240004
ATGACTGATA 128 2133.37 0.213337
TGGTTGCTGG 126 2100.04 0.210004
TCGGTTCTCT 116 1933.37 0.193337
GTTGCTGAGA 112 1866.70 0.18667
CACAAACGGT 108 1800.03 0.180003
TTGGCTGCCC 108 1800.03 0.180003
AGCAGTCCCC 107 1783.36 0.178336

Total number of rows: 20790

Table truncated, full table size 565 Kbytes.




Supplementary data files not provided
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