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Sample GSM135759 Query DataSets for GSM135759
Status Public on Nov 19, 2010
Title 13 wt E11.5 heart
Sample type RNA
 
Source name wild-type heart
Organism Mus musculus
Characteristics strain: 129SvEv
developmental stage: E11.5
tissue: ventricle
Extracted molecule total RNA
Extraction protocol Trizol
Label Biotin
Label protocol 500ng of total RNA was amplified by using MessageAmpTM-Biotin Enhanced Kit from Ambion
 
Hybridization protocol Generic Affymetrix Eukaryotic Array
Scan protocol Generic Affymetrix Eukaryotic Array
Description Targeted deletion of skNAC in mice rsulted in embryonic lethality with cardiac defects by E12.5. In order to investigate the molecular mechanism of the cardiac defect, we compared gene expression profiles of the knockout heart and wild type heart.
Data processing GCOS (MAS5)
 
Submission date Sep 11, 2006
Last update date Nov 19, 2010
Contact name Chong Yon Park
E-mail(s) cpark@gladstone.ucsf.edu
Phone 415-734-2806
Organization name Gladstone Institute
Department Cardiovascular Diseases
Lab Deepak Srivastava
Street address 1650 Owens St.
City San Francisco
State/province CA
ZIP/Postal code 94158
Country USA
 
Platform ID GPL1261
Series (1)
GSE5841 Differential gene expression in mouse skNAC knockout heart at E11.5

Data table header descriptions
ID_REF
VALUE skNAC knockout mouse ventricle - sample 13
ABS_CALL skNAC knockout mouse ventricle - sample 13

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 219.2 P
AFFX-BioB-M_at 341.2 P
AFFX-BioB-3_at 207 P
AFFX-BioC-5_at 570.5 P
AFFX-BioC-3_at 433.4 P
AFFX-BioDn-5_at 736.8 P
AFFX-BioDn-3_at 2722.9 P
AFFX-CreX-5_at 6886.3 P
AFFX-CreX-3_at 9647.2 P
AFFX-DapX-5_at 29.2 A
AFFX-DapX-M_at 19.3 A
AFFX-DapX-3_at 6.2 A
AFFX-LysX-5_at 7.5 A
AFFX-LysX-M_at 12.4 A
AFFX-LysX-3_at 7.2 A
AFFX-PheX-5_at 3.5 A
AFFX-PheX-M_at 5.1 A
AFFX-PheX-3_at 7.8 A
AFFX-ThrX-5_at 31.3 A
AFFX-ThrX-M_at 14.8 A

Total number of rows: 45101

Table truncated, full table size 822 Kbytes.




Supplementary file Size Download File type/resource
GSM135759.CEL.gz 6.4 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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